Table 2

Associated SNPs in the initial genotype analysis

SNP id
Case/control
Genotype
Sex
P

rs729749
Case
CC 0.69 (256)
CT 0.26 (95)
TT 0.05 (18)
Male
0.001

Control
CC 0.57 (141)
CT 0.40 (98)
TT 0.04 (9)


rs789181
Case
AA 0.81 (244)
AG 0.15 (46)
GG 0.03 (10)
Male
0.03

Control
AA 0.78 (146)
AG 0.22 (41)
GG 0.005 (1)


rs1476002
Case
CC 0.77 (395)
CT 0.22 (115)
TT 0.01 (6)
Male
0.05

Control
CC 0.76 (229)
CT 0.20 (61)
TT 0.04 (11)



SNP, single nucleotide polymorphism. Values indicate the genotype frequencies and number (in brackets).

Olsson et al. Arthritis Research & Therapy 2007 9:R98   doi:10.1186/ar2299