|
Resolution: standard / high Figure 6.
Relative differential expression of MMPs, ADAMTS, and metalloproteinase inhibitors
in resorbing cartilage. Bovine nasal cartilage chips were cultured in medium ± IL-1+OSM
for 14 days exactly as described in the legend to Figure 1. RNA was extracted from
the cartilage, and metalloproteinase and inhibitor gene expression were determined
by real-time polymerase chain reaction as described in Materials and methods. The
mean 2-ΔCT of each gene (where ΔCT is calculated as [CT gene - CT 18S]) was used as a measure of relative gene expression to allow simultaneous comparisons.
The heat map was generated using GeneSpring GX 7.3 (Agilent Technologies, Palo Alto,
CA, USA) with the expression range set at 0.025 (high), 5 × 10-6 (normal), and 1 × 10-10 (low) arbitrary units. ADAMTS, a disintegrin and metalloproteinase domain with thrombospondin
motifs; CT, cycle threshold; IL-1, interleukin-1; MMP, matrix metalloproteinase; OSM, oncostatin
M.
Milner et al. Arthritis Research & Therapy 2006 8:R142 doi:10.1186/ar2034 |